Selected Publications

Geyman, E. C.; Ke, Y.; Magyar, J. S.; Reahl, J. N.; Soldano, V.; Brown, N. D.; West, A. J.; Fischer, W. W.; Lamb, M. P. "Scaling laws for sediment storage and turnover in river floodplains," Sci. Adv. 2025, 11, eadu8574.
 
 Smith, M. I.; Ke, Y.; Geyman, E. C.; Reahl, J. N.; Douglas, M. M.; Seelen, E. A.; Magyar, J. S.; Dunne, K. B. J.; Mutter, E. A.; Fischer, W. W.; Lamb, M. P.; West, A. J. "Mercury stocks in discontinuous permafrost and their mobilization by river migration in the Yukon River Basin," Environ. Res. Lett. 2024, 19, 084041.

Coscia, A.; Sapers, H. M.; Deutsch, N.; Khurana, M.; Magyar, J. S.; Parra, S. P.; Utter, D. R.; Wipfler, R. L.; Caress, D. W.; Martin, E. J.; Paduan, J. B.; Hendrie, M.; Lombeyda, S.; Mushkin, H.; Endert, A.; Davidoff, S.; Orphan, V. J. "DeepSee: Multidimensional Visualizations of Seabed Ecosystems," CHI'24: Proceedings of the 2024 Conference on Human Factors in Computing Systems, 2024, 210, 1-16.

Smith, B.; Mahon, R.; Lincoln, T.; Hagen, C.; Olsen-Valdez, J.; Magyar, J.; Trower, E. "Wave Dynamics and Sediment Transport in Great Salt Lake: A Model-Data Comparison," Great Salt Lake and the Bonneville Basin: Geologic history and Anthropocene Issues, Utah Geological Association Publication, 2024, 51, 1-18.          https://doi.org/10.31711/ugap.v51i.139 

Kemeny, P. K.; Li, G. K.; Douglas, M.; Berelson, W.; Chadwick, A. J.; Dalleska, N. F.; Lamb, M. P.; Larsen, W.; Magyar, J. S.; Rollins, N. E.; Rowland, J.; Smith, M. I.; Torres, M. A.; Webb, S. M.; Fischer. W. W.; West, A. J. "Arctic Permafrost Thawing Enhances Sulfide Oxidation," Global Biogeochemical Cycles 2023, 37, e2022GB007644. https://doi.org/10.1029/2022GB007644

Laso-Pérez, R.; Wu, F.; Crémière, A.; Speth, D. R.; Magyar, J. S.; Zhao, K.; Krupovic, M.; Orphan, V. J. "Evolutionary diversification of methanotrophic ANME-1 archaea and their expansive virome," Nature Microbiology 2023, 8, 231-245. doi.org/10.1038/s41564-022-01297-4

Lincoln, T. A.; Webb, S. M.; Present, T. M.; Magyar, J. S.; Trower, E. J. "Microbial Activity and Neomorphism Influence the Composition and Microfabric of Ooids From Great Salt Lake, UT," The Sedimentary Record 2022, 20. https://doi.org/10.2110/001c.56183

Aronson, H. S.; Monteverde, D. R.; Barnes, B. D.; Johnson, B. R.; Zawaski, M. J.; Speth, D. R.; Wang, X. T.; Wu, F.; Webb, S. M.; Trower, E. J.; Magyar, J. S.; Sessions, A. L.; Orphan, V. J.; Geobiology Course 2017; Geobiology Course 2018; Fischer, W. W. "Sulfur cycling at natural hydrocarbon and sulfur seeps in Santa Paula Creek, CA," Geobiology 2022, 20, 707-725. https://doi.org/10.1111/gbi.12512

Speth, D. R.; Wu, F. B.; Connon, S. A.; Lim, S.; Magyar, J. S.; Peña-Salinas, M. E.; Quake, S. R.; Orphan, V. J. "Microbial communities of Auka hydrothermal sediments shed light on vent biogeography and the evolutionary history of thermophily," ISME J. 2022, 16, 1750-1764. https://doi.org/10.1038/s41396-022-01222-x

Lingappa, U. F.; Yeager, C. M.; Sharma, A.; Lanza, N. L.; Morales, D. P.; Xie, G.; Atencio, A. D.; Chadwick, G. L.; Monteverde, D. R.; Magyar, J. S.; Webb, S. M.; Valentine, J. S.; Hoffman, B. M.; Fischer, W. W. “An ecophysiological explanation for manganese enrichment in rock varnish,” Proc. Natl. Acad. Sci. USA, 2021, 118, e2025188118.  10.1073/pnas.2025188118   

Smith, B. P.; Ingalls, M.; Trower, E. J.; Lingappa, U. F.; Present, T. M.; Magyar, J. S.; Fischer, W. W. “Physical Controls on Carbonate Intraclasts: Modern Flat Pebbles from Great Salt Lake, Utah,” J. Geophys. Res.: Earth Surf. 2020, 125,e2020JF005733.      10.1029/2020JF005733   

​Ingalls, M.; Blättler, C. L.; Higgins, J. A.; Magyar, J. S.; Eiler, J. M.; Fischer, W. W. “P/Ca in carbonates as a proxy for alkalinity and phosphate levels,” Geophys. Res. Lett. 2020, 47, e2020GL088804.  10.1029/2020GL088804   
Bublitz, D. A. C.; Chadwick, G. L.; Magyar, J. S.; Sandoz, K. M.; Brooks, D. M.; Mesnage, S.; Ladinsky, M. S.; Garber, A. I.; Bjorkman, P. J.; Orphan, V. J.; McCutcheon, J. P. "Peptidoglycan production by an insect-bacterial mosaic," Cell 2019, 179, 703-712. Available online at https://doi.org/10.1016/j.cell.2019.08.054.

Lingappa, U. F.; Monteverde, D. R.; Magyar, J. S.; Valentine, J. S.; Fischer, W. W. “How manganese empowered life with dioxygen (and vice versa),” Free Rad. Biol. Med. 2019, 140, 113-125. 10.1016/j.freeradbiomed.2019.01.036   

Liu, P. C.; Mailloux, B. J.; Wagner, A.; Magyar, J. S.; Culligan, P. J. "Can varying velocity conditions be one possible explanation for differences between laboratory and field observations of bacterial transport in porous media?" Adv. Water Res. 2016, 88, 97-108. Available online at http://dx.doi.org/10.1016/j.advwatres.2015.12.011.

Sokolovskaya, O. M.; Magyar, J. S.; Buzzeo, M. C. “Electrochemical behavior of cytochrome c552 from a psychrophilic microorganism,” J. Phys. Chem. C 2014, 118, 18829-18835.  Available online at http://dx.doi.org/10.1021/jp501146e.

Harvilla, P. B.; Wolcott, H. N.; Magyar, J. S.  “The structure of ferricytochrome c552 from the psychrophilic marine bacterium Colwellia psychrerythraea 34H,” Metallomics 2014, 6, 1126-1130.  Available online at http://dx.doi.org/10.1039/C4MT00045E.

Oswald, V.F.; Chen, W.; Harvilla, P.; Magyar, J. S. “Overexpression, purification, and enthalpy of unfolding of ferricytochrome c552 from a psychrophilic microorganism,” J. Inorg. Biochem. 2014, 131, 76.  Available online at http://dx.doi.org/10.1016/j.jinorgbio.2013.11.002.

Gray, H.B.; Magyar, J.S. "Metals, Microbes, and Solar Fuels," in Letters to a Young Chemist, A. Ghosh, Ed.  Hoboken: Wiley, 2011. Available online at http://dx.doi.org/10.1002/9781118007099.ch17.

Magyar, J.S.; Turano, P. "Structural Zinc-Binding Domains," in Biological Inorganic Chemistry: Structure and Reactivity, I. Bertini; Gray, H.B.; Stiefel, E.I.; Valentine, J.S.; Eds.  Mill Valley, CA: University Science Books, 2006.

Magyar, J. S.; Weng, T.C.; Stern, C.M.; Dye, D.F.; Rous, B.W.; Payne, J.C.; Bridgewater, B.M.; Mijovilovich, A.; Parkin, G.; Zaleski, J. M.; Penner-Hahn, J. E.; Godwin, H. A. "Reexamination of lead(II) coordination preferences in sulfur-rich sites: Implications for a critical mechanism of lead poisoning," J. Am. Chem. Soc. 2005, 127, 9495-9505. Available online at http://dx.doi.org/10.1021/ja0424530.

Magyar, J. S.; Godwin, H. A. "Spectro-potentiometric analysis of metal binding to structural zinc binding sites: Accounting quantitatively for pH and metal ion buffering effects,"  Anal. Biochem. 2003, 320, 39-54. Available online at http://dx.doi.org/10.1016/S0003-2697(03)00281-1.
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Claudio, E.S.; Godwin, H.A.; Magyar, J. S. "Fundamental coordination chemistry, environmental chemistry, and biochemistry of lead(II),"Prog. Inorg. Chem. 2003, 51, 1-144.  Available online at http://dx.doi.org/10.1002/0471267287.ch1.